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Species belonging to selected taxon:
Avena barbata
ABOUT THIS RECORD
ID:
MNEST000188
species:
Avena barbata
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Avena barbata
Avena
Aveninae
Poeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCCGACCCATATT
miRNA*
TATGGGTTGAGGGAGTATCA
mismatches:
0
bulges:
1
View larger
pre-miRNA
AACAATGTTAT
ATACTCCCTCCGACCCATATT
AGTTGACTTAGATTCATCTAGATATGAATGTATCTAGTCAAGTTTTAGTGCTAGATACATCTGAATCT
AGACAAATTTGAGTCAACTAA
TATGGGTTGAGGGAGTATCA
TTTTGCAG
dot-bracket secondary structure
.....(((.((
((((((((((.((((((((((
((((((((((((((..(((((((.((.((((((((((.((........)))))))))))).)).))))
)))..))))))))))))))))
)))))))))))))))))).)
)...))).
SIMILARITIES
miRBase
far-MIR1122
:
0.000002
PMRD
tmo-miR1122
:
0.000002
microPC
miR1122
:
0.00003
UniProt
no hits
RFAM
MIR1122: 0.0000000001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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